Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.25■□□□□ 0.35
GGPS1O95749 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.25■□□□□ 0.35
GGPS1O95749 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.25■□□□□ 0.35
GGPS1O95749 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.25■□□□□ 0.35
GGPS1O95749 ECM1P1-201ENST00000604092 1279 ntBASIC17.25■□□□□ 0.35
GGPS1O95749 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 GPR182-203ENST00000622922 591 ntBASIC17.25■□□□□ 0.35
GGPS1O95749 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.25■□□□□ 0.35
GGPS1O95749 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.25■□□□□ 0.35
GGPS1O95749 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.24■□□□□ 0.35
GGPS1O95749 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 AC126177.1-201ENST00000547829 2218 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 AC011270.2-201ENST00000624293 2550 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 AL645937.2-201ENST00000396808 931 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.24■□□□□ 0.35
GGPS1O95749 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.24■□□□□ 0.35
GGPS1O95749 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 SAMD11P1-201ENST00000571429 661 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.24■□□□□ 0.35
GGPS1O95749 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 AC103702.1-201ENST00000548801 2630 ntBASIC17.24■□□□□ 0.35
GGPS1O95749 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GGPS1O95749 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GGPS1O95749 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GGPS1O95749 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.23■□□□□ 0.35
GGPS1O95749 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.23■□□□□ 0.35
GGPS1O95749 RN7SL48P-201ENST00000579283 293 ntBASIC17.23■□□□□ 0.35
GGPS1O95749 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.23■□□□□ 0.35
GGPS1O95749 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.23■□□□□ 0.35
GGPS1O95749 AC006453.4-201ENST00000636949 1252 ntBASIC17.23■□□□□ 0.35
GGPS1O95749 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 AL645728.2-202ENST00000641679 227 ntBASIC17.23■□□□□ 0.35
GGPS1O95749 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms