Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC015936.2-201ENST00000593177 259 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC008735.3-201ENST00000596646 500 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 REXO1L4P-201ENST00000605109 1937 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.77□□□□□ -0.04
PRICKLE3O43900 MST1L-201ENST00000442552 2185 ntBASIC14.77□□□□□ -0.04
PRICKLE3O43900 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PRICKLE3O43900 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PRICKLE3O43900 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 RNU1-114P-201ENST00000365297 166 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 BAATP1-201ENST00000412284 1225 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 TTTY23B-201ENST00000442790 549 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 AC012441.1-201ENST00000446669 685 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 AC114812.1-204ENST00000449669 728 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PRICKLE3O43900 AC104640.1-201ENST00000562617 2109 ntBASIC14.77□□□□□ -0.05
PRICKLE3O43900 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PRICKLE3O43900 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 AC012508.2-201ENST00000567613 1472 ntBASIC14.76□□□□□ -0.05
PRICKLE3O43900 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.76□□□□□ -0.05
PRICKLE3O43900 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.76□□□□□ -0.05
PRICKLE3O43900 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PRICKLE3O43900 AL360270.3-201ENST00000609118 1348 ntBASIC14.76□□□□□ -0.05
PRICKLE3O43900 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
PRICKLE3O43900 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.76□□□□□ -0.05
PRICKLE3O43900 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PRICKLE3O43900 AL139094.1-201ENST00000405549 1188 ntBASIC14.76□□□□□ -0.05
PRICKLE3O43900 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms