Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RIPK2O43353 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 AC104457.1-201ENST00000401024 814 ntBASIC15.69■□□□□ 0.1
RIPK2O43353 FO393414.2-201ENST00000405153 598 ntBASIC15.69■□□□□ 0.1
RIPK2O43353 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.69■□□□□ 0.1
RIPK2O43353 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RIPK2O43353 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.69■□□□□ 0.1
RIPK2O43353 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.69■□□□□ 0.1
RIPK2O43353 RARRES2P9-201ENST00000565168 469 ntBASIC15.69■□□□□ 0.1
RIPK2O43353 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 AC092902.6-201ENST00000641783 218 ntBASIC15.69■□□□□ 0.1
RIPK2O43353 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.69■□□□□ 0.1
RIPK2O43353 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.69■□□□□ 0.1
RIPK2O43353 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RIPK2O43353 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
RIPK2O43353 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.69■□□□□ 0.1
RIPK2O43353 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RIPK2O43353 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 AC007787.1-201ENST00000588095 1583 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPK2O43353 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RIPK2O43353 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 AC079140.1-201ENST00000508039 487 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 KRT8P48-201ENST00000515599 1220 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 IGHV3-62-201ENST00000520057 340 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 BANF1P1-201ENST00000553684 263 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPK2O43353 AC015910.1-201ENST00000579400 975 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPK2O43353 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RIPK2O43353 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPK2O43353 HLA-A-201ENST00000376802 1334 ntBASIC15.68■□□□□ 0.1
RIPK2O43353 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPK2O43353 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 MBLAC2-202ENST00000514906 1936 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.67■□□□□ 0.1
RIPK2O43353 SPDYE11-202ENST00000450699 704 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 SLC25A39P2-201ENST00000537614 270 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 SPDYE9P-201ENST00000570642 692 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms