Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MIR6775-201ENST00000617557 69 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 PDIA3P1-201ENST00000471856 1510 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN5O00501 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN5O00501 AC138035.3-201ENST00000622706 2791 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 AL162727.3-201ENST00000635661 2787 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 LINC00554-201ENST00000564841 3011 ntBASIC16.22■□□□□ 0.19
CLDN5O00501 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLDN5O00501 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN5O00501 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN5O00501 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 KRT8P35-201ENST00000483942 1338 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN5O00501 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLDN5O00501 MIR658-201ENST00000385210 100 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 AC104457.1-201ENST00000401024 814 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 KRT43P-201ENST00000434019 910 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN5O00501 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN5O00501 AC022210.1-201ENST00000449856 793 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN5O00501 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLDN5O00501 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 AC017083.2-201ENST00000608069 979 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 AC145423.3-201ENST00000615987 467 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLDN5O00501 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN5O00501 PRSS30P-206ENST00000641773 873 ntBASIC16.21■□□□□ 0.19
CLDN5O00501 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN5O00501 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN5O00501 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN5O00501 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN5O00501 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLDN5O00501 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN5O00501 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN5O00501 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN5O00501 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.21■□□□□ 0.18
CLDN5O00501 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN5O00501 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN5O00501 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN5O00501 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 REXO1L4P-201ENST00000605109 1937 ntBASIC16.2■□□□□ 0.18
CLDN5O00501 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN5O00501 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN5O00501 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN5O00501 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.2■□□□□ 0.18
CLDN5O00501 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN5O00501 AC119751.2-201ENST00000504529 210 ntBASIC16.2■□□□□ 0.18
CLDN5O00501 KRT18P25-201ENST00000508931 1278 ntBASIC16.2■□□□□ 0.18
CLDN5O00501 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN5O00501 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN5O00501 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN5O00501 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms