Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 AC007274.1-201ENST00000439805 662 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 CTBP2P5-201ENST00000454986 1264 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.32■□□□□ 0.36
DDX39AO00148 AC119751.2-201ENST00000504529 210 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.32■□□□□ 0.36
DDX39AO00148 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 MIR6805-201ENST00000615055 62 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX39AO00148 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
DDX39AO00148 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 AC092933.1-201ENST00000393644 945 ntBASIC17.31■□□□□ 0.36
DDX39AO00148 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.31■□□□□ 0.36
DDX39AO00148 AC004066.1-201ENST00000502488 802 ntBASIC17.31■□□□□ 0.36
DDX39AO00148 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.31■□□□□ 0.36
DDX39AO00148 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.31■□□□□ 0.36
DDX39AO00148 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX39AO00148 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX39AO00148 AC007787.1-201ENST00000588095 1583 ntBASIC17.31■□□□□ 0.36
DDX39AO00148 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
DDX39AO00148 AC067930.6-201ENST00000623257 4947 ntBASIC17.31■□□□□ 0.36
DDX39AO00148 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX39AO00148 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 KRT8P35-201ENST00000483942 1338 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DDX39AO00148 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 SSR4P1-203ENST00000599569 2260 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 AL158070.2-201ENST00000623713 1621 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX39AO00148 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX39AO00148 AC007551.1-201ENST00000457394 519 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX39AO00148 KRT18P25-201ENST00000508931 1278 ntBASIC17.3■□□□□ 0.36
DDX39AO00148 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.3■□□□□ 0.36
DDX39AO00148 AC104989.1-201ENST00000519711 778 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms