Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC018442.1-201ENST00000421439 2061 ntBASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC092474.2-201ENST00000424288 719 ntBASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC021087.4-201ENST00000563761 564 ntBASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
TPRKBQ9Y3C4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 AC084364.1-201ENST00000551967 1556 ntBASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TPRKBQ9Y3C4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 AC131212.3-201ENST00000624087 4219 ntBASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 TCAF1P1-201ENST00000414990 2232 ntBASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 PCED1CP-201ENST00000419887 785 ntBASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 GHSR-202ENST00000427970 912 ntBASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.13□□□□□ -0.15
TPRKBQ9Y3C4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms