Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 OR2I1P-210ENST00000642037 4691 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MIR1233-2-201ENST00000408138 82 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MIR1233-1-201ENST00000408722 82 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AL353705.2-201ENST00000428243 662 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CNN2P11-201ENST00000429351 262 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 RBPMS2P1-201ENST00000437762 623 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AL139010.1-201ENST00000454878 894 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC134684.3-201ENST00000641758 218 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 LINC01230-201ENST00000625222 3017 ntBASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HHLA3Q9XRX5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC027601.5-201ENST00000624065 2482 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AL691432.1-201ENST00000596308 1422 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AL928921.2-201ENST00000641325 2442 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms