Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 C1QBPP1-201ENST00000400117 770 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 NUS1P3-201ENST00000423502 862 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 TERF1P3-201ENST00000505638 1227 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AC190387.1-201ENST00000551683 408 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AC140912.1-201ENST00000577171 1054 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AL158070.2-201ENST00000623713 1621 ntBASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGC3Q9UN70 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 TSPY26P-202ENST00000565928 3884 ntBASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AJ011931.1-201ENST00000618749 2492 ntBASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGC3Q9UN70 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 AC068418.2-201ENST00000577309 3703 ntBASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 LINC01101-201ENST00000622953 1884 ntBASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 SOCS2P1-201ENST00000417727 557 ntBASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 HLA-K-203ENST00000430151 1046 ntBASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGC3Q9UN70 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms