Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AL023803.2-201ENST00000620080 638 ntBASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AC092506.1-202ENST00000401022 528 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AL354877.1-201ENST00000424412 413 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 NKAIN1P1-201ENST00000435754 582 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 EIF4HP1-201ENST00000453115 687 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 MIR3619-201ENST00000579667 83 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AC138649.2-201ENST00000615886 705 ntBASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC10Q9NYD6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 FKBP4P6-201ENST00000457486 1332 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AL008707.1-201ENST00000422498 534 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AC016700.1-201ENST00000429424 312 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AC044849.1-201ENST00000519737 1188 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AC004466.1-201ENST00000599515 1080 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms