Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 RPSAP31-201ENST00000416648 895 ntBASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 RN7SL258P-201ENST00000478664 300 ntBASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 AC009884.2-201ENST00000603110 324 ntBASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC52A1Q9NWF4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 AC012508.2-201ENST00000567613 1472 ntBASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 RN7SL736P-201ENST00000613111 269 ntBASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC52A1Q9NWF4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC52A1Q9NWF4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms