Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC136621.1-201ENST00000624017 2304 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TPM3P8-201ENST00000330554 643 ntBASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 RNU1-114P-201ENST00000365297 166 ntBASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 MIR3907-201ENST00000579424 151 ntBASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 PAUPAR-201ENST00000630360 2965 ntBASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM7Q9NR12 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 AC087481.3-201ENST00000602886 1894 ntBASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 KLF2P2-201ENST00000416807 1039 ntBASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 AC244157.2-201ENST00000616239 1006 ntBASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 TMBIM7P-203ENST00000641617 1718 ntBASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM7Q9NR12 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 RN7SL11P-201ENST00000471305 293 ntBASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms