Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TUBB1P1-201ENST00000503144 1300 ntBASIC17.93■□□□□ 0.46
SLF1Q9BQI6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLF1Q9BQI6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLF1Q9BQI6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.93■□□□□ 0.46
SLF1Q9BQI6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AP005117.1-202ENST00000581724 1908 ntBASIC17.92■□□□□ 0.46
SLF1Q9BQI6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AC025279.2-201ENST00000569730 653 ntBASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 AC092850.2-201ENST00000623821 2697 ntBASIC17.92■□□□□ 0.46
SLF1Q9BQI6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLF1Q9BQI6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC073347.1-201ENST00000421633 2643 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 MIR1908-201ENST00000410394 80 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC026954.1-201ENST00000429771 1293 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 ACTBP11-201ENST00000436287 1126 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AL355994.2-201ENST00000447882 704 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 KRT8P35-201ENST00000483942 1338 ntBASIC17.91■□□□□ 0.46
SLF1Q9BQI6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLF1Q9BQI6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SLF1Q9BQI6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms