Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.99■□□□□ 0.15
CDK5RAP1Q96SZ6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 MSTO2P-201ENST00000314835 1709 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 RNU1-114P-201ENST00000365297 166 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 MIR1909-201ENST00000411312 80 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 KRT8P14-201ENST00000414254 1442 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC007551.1-201ENST00000457394 519 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC106760.1-201ENST00000508690 800 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC079316.1-201ENST00000548397 411 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AC009090.5-201ENST00000624886 2285 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LRRC59-203ENST00000576448 1531 ntBASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CDK5RAP1Q96SZ6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 AP000812.2-201ENST00000538934 718 ntBASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 AL008721.1-201ENST00000609964 604 ntBASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 AC132938.4-201ENST00000623835 848 ntBASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDK5RAP1Q96SZ6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDK5RAP1Q96SZ6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms