Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AC136604.1-201ENST00000418535 575 ntBASIC14.16□□□□□ -0.14
SNX18Q96RF0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AL592309.1-201ENST00000443127 649 ntBASIC14.16□□□□□ -0.14
SNX18Q96RF0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AC069335.1-201ENST00000489972 472 ntBASIC14.16□□□□□ -0.14
SNX18Q96RF0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AL161772.1-201ENST00000610494 4412 ntBASIC14.16□□□□□ -0.14
SNX18Q96RF0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 AL356585.2-201ENST00000625078 2396 ntBASIC14.16□□□□□ -0.14
SNX18Q96RF0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 AC127383.1-201ENST00000444697 1800 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 DGCR9-201ENST00000609630 2415 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 AL139400.1-201ENST00000366220 510 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 SLC25A39P2-201ENST00000537614 270 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 HNRNPUP1-201ENST00000554987 333 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 AC097359.3-201ENST00000603982 1210 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 UXT-AS1-201ENST00000590504 1525 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
SNX18Q96RF0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 AC018892.3-201ENST00000623986 2499 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 CICP17-201ENST00000418553 2377 ntBASIC14.15□□□□□ -0.14
SNX18Q96RF0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNX18Q96RF0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SNX18Q96RF0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX18Q96RF0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms