Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AL162726.2-201ENST00000438986 1017 ntBASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AP001582.1-201ENST00000525856 295 ntBASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 LINC00554-201ENST00000564841 3011 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC063926.3-201ENST00000624734 5658 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AP006294.1-201ENST00000415407 339 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 BX539320.1-201ENST00000623759 877 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 CU634019.7-201ENST00000624153 1185 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 FP236241.2-201ENST00000624906 1185 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 AP000845.1-201ENST00000581677 2131 ntBASIC12.8□□□□□ -0.36
GAFA1Q96PS6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms