Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FGD4Q96M96 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FGD4Q96M96 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FGD4Q96M96 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
FGD4Q96M96 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
FGD4Q96M96 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 LINC02199-201ENST00000506655 2702 ntBASIC17.39■□□□□ 0.37
FGD4Q96M96 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FGD4Q96M96 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 AL354989.2-201ENST00000435838 1540 ntBASIC17.39■□□□□ 0.37
FGD4Q96M96 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 TPM3P8-201ENST00000330554 643 ntBASIC17.39■□□□□ 0.37
FGD4Q96M96 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FGD4Q96M96 AL645937.2-201ENST00000396808 931 ntBASIC17.39■□□□□ 0.37
FGD4Q96M96 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.39■□□□□ 0.37
FGD4Q96M96 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.39■□□□□ 0.37
FGD4Q96M96 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FGD4Q96M96 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.39■□□□□ 0.37
FGD4Q96M96 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 CYP2T1P-202ENST00000641596 2535 ntBASIC17.38■□□□□ 0.37
FGD4Q96M96 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.38■□□□□ 0.37
FGD4Q96M96 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 AC004898.1-201ENST00000451057 766 ntBASIC17.38■□□□□ 0.37
FGD4Q96M96 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 AC004066.1-201ENST00000502488 802 ntBASIC17.38■□□□□ 0.37
FGD4Q96M96 ACTG1P17-201ENST00000558391 1119 ntBASIC17.38■□□□□ 0.37
FGD4Q96M96 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.38■□□□□ 0.37
FGD4Q96M96 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.38■□□□□ 0.37
FGD4Q96M96 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
FGD4Q96M96 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.38■□□□□ 0.37
FGD4Q96M96 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FGD4Q96M96 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
FGD4Q96M96 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FGD4Q96M96 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.37■□□□□ 0.37
FGD4Q96M96 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FGD4Q96M96 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FGD4Q96M96 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
FGD4Q96M96 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.37■□□□□ 0.37
FGD4Q96M96 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FGD4Q96M96 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms