Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 TCAF1P1-201ENST00000414990 2232 ntBASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 MST1P2-201ENST00000457982 2291 ntBASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 TPM4P1-201ENST00000436100 807 ntBASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 DGCR9-201ENST00000609630 2415 ntBASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP6Q96FZ7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 AL691432.1-201ENST00000596308 1422 ntBASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 KRT18P34-201ENST00000488218 1270 ntBASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 AL049840.3-201ENST00000602669 611 ntBASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP6Q96FZ7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms