Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC068587.6-202ENST00000641839 5619 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AC138035.3-201ENST00000622706 2791 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AC068587.3-201ENST00000526613 355 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 BTNL10-201ENST00000595971 695 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AP002414.2-201ENST00000591780 3365 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 AC023024.2-201ENST00000623561 1993 ntBASIC15.29■□□□□ 0.04
SCAMP4Q969E2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAMP4Q969E2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 AL158070.2-201ENST00000623713 1621 ntBASIC15.28■□□□□ 0.04
SCAMP4Q969E2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 AC134312.5-201ENST00000568031 1313 ntBASIC15.28■□□□□ 0.04
SCAMP4Q969E2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 ACKR1-201ENST00000368121 1240 ntBASIC15.28■□□□□ 0.04
SCAMP4Q969E2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 BAATP1-201ENST00000412284 1225 ntBASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 AC148477.4-201ENST00000613430 1793 ntBASIC15.28■□□□□ 0.04
SCAMP4Q969E2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAMP4Q969E2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 KRT8P44-201ENST00000441609 1350 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms