Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 AC127383.1-201ENST00000444697 1800 ntBASIC13.43□□□□□ -0.26
BEST4Q8NFU0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BEST4Q8NFU0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC092474.2-201ENST00000424288 719 ntBASIC13.42□□□□□ -0.26
BEST4Q8NFU0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC243562.2-201ENST00000561247 970 ntBASIC13.42□□□□□ -0.26
BEST4Q8NFU0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC117500.6-201ENST00000624871 588 ntBASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AC018892.3-201ENST00000623986 2499 ntBASIC13.42□□□□□ -0.26
BEST4Q8NFU0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BEST4Q8NFU0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 HNRNPDP1-201ENST00000439535 754 ntBASIC13.41□□□□□ -0.26
BEST4Q8NFU0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC108751.1-201ENST00000490852 363 ntBASIC13.41□□□□□ -0.26
BEST4Q8NFU0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.41□□□□□ -0.26
BEST4Q8NFU0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms