Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AP000845.1-201ENST00000581677 2131 ntBASIC14.5□□□□□ -0.09
ARHGEF39Q8N4T4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.5□□□□□ -0.09
ARHGEF39Q8N4T4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ARHGEF39Q8N4T4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ARHGEF39Q8N4T4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC138035.3-201ENST00000622706 2791 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 GK-202ENST00000378941 458 ntTSL 3 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 MIR1909-201ENST00000411312 80 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 RAB43P1-201ENST00000561790 589 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC025279.2-201ENST00000569730 653 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC145423.3-201ENST00000615987 467 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 AC012508.2-201ENST00000567613 1472 ntBASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ARHGEF39Q8N4T4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AL157414.3-201ENST00000624276 1954 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AL355864.2-201ENST00000447420 863 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AC022210.1-201ENST00000449856 793 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 FTH1P14-201ENST00000482930 551 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 KRT18P25-201ENST00000508931 1278 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AP000812.2-201ENST00000538934 718 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 AC073347.1-201ENST00000421633 2643 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ARHGEF39Q8N4T4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms