Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.81■□□□□ 0.28
VPS52Q8N1B4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC092933.1-201ENST00000393644 945 ntBASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 BRWD1P1-201ENST00000401091 371 ntBASIC16.8■□□□□ 0.28
VPS52Q8N1B4 BAATP1-201ENST00000412284 1225 ntBASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 RNA5SP412-201ENST00000516234 123 ntBASIC16.8■□□□□ 0.28
VPS52Q8N1B4 HNRNPUP1-201ENST00000554987 333 ntBASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS52Q8N1B4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 TUBB1P2-201ENST00000422712 1306 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 TUBB1P1-201ENST00000503144 1300 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AC134312.5-201ENST00000568031 1313 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 FAM21FP-201ENST00000426241 1131 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AL355994.2-201ENST00000447882 704 ntBASIC16.79■□□□□ 0.28
VPS52Q8N1B4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS52Q8N1B4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms