Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC023310.1-201ENST00000554836 735 ntBASIC15.71■□□□□ 0.11
CHPFQ8IZ52 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC009542.2-202ENST00000619004 1067 ntBASIC15.71■□□□□ 0.11
CHPFQ8IZ52 GPR182-203ENST00000622922 591 ntBASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 AC104640.1-201ENST00000562617 2109 ntBASIC15.71■□□□□ 0.11
CHPFQ8IZ52 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHPFQ8IZ52 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CHPFQ8IZ52 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHPFQ8IZ52 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHPFQ8IZ52 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHPFQ8IZ52 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CHPFQ8IZ52 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 KRT8P35-201ENST00000483942 1338 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AC063926.3-201ENST00000624734 5658 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 CNN2P8-201ENST00000421872 913 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 PFN1P12-201ENST00000455938 534 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AC145423.3-201ENST00000615987 467 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AC008687.7-202ENST00000637404 953 ntBASIC15.7■□□□□ 0.1
CHPFQ8IZ52 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHPFQ8IZ52 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHPFQ8IZ52 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms