Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 MIR3677-201ENST00000578964 60 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 CYP2T1P-202ENST00000641596 2535 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 NOC2LP1-201ENST00000450578 752 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AGPAT5P1-201ENST00000455855 1019 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC138696.2-201ENST00000607376 223 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC138466.3-201ENST00000619983 221 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 AL031713.1-201ENST00000564813 661 ntBASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13BQ7Z7G8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 AP000845.1-201ENST00000581677 2131 ntBASIC9.27□□□□□ -0.92
VPS13BQ7Z7G8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HLA-K-203ENST00000430151 1046 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HLA-J-204ENST00000495278 958 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 MME-218ENST00000625667 363 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC127383.1-201ENST00000444697 1800 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms