Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 TCAF2P1-201ENST00000291129 2421 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AP000812.2-201ENST00000538934 718 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AC025181.2-201ENST00000606994 802 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AL645728.2-202ENST00000641679 227 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 AC144831.1-201ENST00000573312 2656 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 RPL7P3-201ENST00000441388 714 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 KLF2P4-201ENST00000451959 1225 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AC007551.1-201ENST00000457394 519 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AP001582.1-201ENST00000525856 295 ntBASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.29□□□□□ -0.12
H3F3CQ6NXT2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms