Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 AC244394.1-201ENST00000435000 1665 ntBASIC18.86■□□□□ 0.61
DDR1Q08345 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
DDR1Q08345 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.86■□□□□ 0.61
DDR1Q08345 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.86■□□□□ 0.61
DDR1Q08345 SCARNA21-201ENST00000517026 139 ntBASIC18.86■□□□□ 0.61
DDR1Q08345 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.86■□□□□ 0.61
DDR1Q08345 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.86■□□□□ 0.61
DDR1Q08345 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.86■□□□□ 0.61
DDR1Q08345 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.86■□□□□ 0.61
DDR1Q08345 MEG3_2.1-201ENST00000611456 105 ntBASIC18.86■□□□□ 0.61
DDR1Q08345 AC051619.9-201ENST00000623237 597 ntBASIC18.86■□□□□ 0.61
DDR1Q08345 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DDR1Q08345 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDR1Q08345 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDR1Q08345 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 AL360270.3-201ENST00000609118 1348 ntBASIC18.85■□□□□ 0.61
DDR1Q08345 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.85■□□□□ 0.61
DDR1Q08345 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DDR1Q08345 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDR1Q08345 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 AL627231.1-201ENST00000394467 1125 ntBASIC18.85■□□□□ 0.61
DDR1Q08345 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.85■□□□□ 0.61
DDR1Q08345 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.85■□□□□ 0.61
DDR1Q08345 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.85■□□□□ 0.61
DDR1Q08345 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.85■□□□□ 0.61
DDR1Q08345 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.85■□□□□ 0.61
DDR1Q08345 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.85■□□□□ 0.61
DDR1Q08345 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.85■□□□□ 0.61
DDR1Q08345 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.85■□□□□ 0.61
DDR1Q08345 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.85■□□□□ 0.61
DDR1Q08345 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
DDR1Q08345 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDR1Q08345 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DDR1Q08345 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDR1Q08345 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 AL513477.1-201ENST00000602865 2407 ntBASIC18.84■□□□□ 0.61
DDR1Q08345 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.84■□□□□ 0.61
DDR1Q08345 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 AC112504.1-201ENST00000623415 1841 ntBASIC18.84■□□□□ 0.61
DDR1Q08345 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.84■□□□□ 0.61
DDR1Q08345 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.84■□□□□ 0.61
DDR1Q08345 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 RN7SKP230-201ENST00000365642 335 ntBASIC18.84■□□□□ 0.61
DDR1Q08345 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DDR1Q08345 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.84■□□□□ 0.61
DDR1Q08345 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.84■□□□□ 0.61
DDR1Q08345 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 AP001065.2-201ENST00000617205 644 ntBASIC18.84■□□□□ 0.61
DDR1Q08345 AC242376.2-201ENST00000619355 883 ntBASIC18.84■□□□□ 0.61
DDR1Q08345 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DDR1Q08345 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.84■□□□□ 0.61
DDR1Q08345 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDR1Q08345 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms