Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC9.23□□□□□ -0.93
HSPG2P98160 AC010632.2-201ENST00000588369 1224 ntBASIC9.23□□□□□ -0.93
HSPG2P98160 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC9.23□□□□□ -0.93
HSPG2P98160 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC9.23□□□□□ -0.93
HSPG2P98160 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HSPG2P98160 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
HSPG2P98160 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.23□□□□□ -0.93
HSPG2P98160 AL137077.2-201ENST00000635124 1608 ntBASIC9.23□□□□□ -0.93
HSPG2P98160 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC9.23□□□□□ -0.93
HSPG2P98160 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
HSPG2P98160 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
HSPG2P98160 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
HSPG2P98160 FDPSP7-201ENST00000429043 1054 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 AC084262.1-201ENST00000567818 751 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 AC008825.2-201ENST00000603374 718 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
HSPG2P98160 AC002044.2-201ENST00000624910 970 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 CELP-201ENST00000411440 1249 ntTSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC9.22□□□□□ -0.93
HSPG2P98160 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
HSPG2P98160 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC9.22□□□□□ -0.93
HSPG2P98160 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 AC080080.1-201ENST00000625121 2420 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 JPT2-203ENST00000382711 894 ntTSL 4 BASIC9.22□□□□□ -0.93
HSPG2P98160 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC9.22□□□□□ -0.93
HSPG2P98160 HIST1H2APS2-201ENST00000454426 370 ntBASIC9.22□□□□□ -0.93
HSPG2P98160 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 PSME2-217ENST00000615264 874 ntTSL 5 BASIC9.22□□□□□ -0.93
HSPG2P98160 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
HSPG2P98160 PSME2-218ENST00000630027 185 ntTSL 3 BASIC9.22□□□□□ -0.93
HSPG2P98160 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HSPG2P98160 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC9.22□□□□□ -0.93
HSPG2P98160 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 MBP-201ENST00000354542 575 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 NQO2-204ENST00000380454 851 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC9.21□□□□□ -0.93
HSPG2P98160 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HSPG2P98160 AC092612.1-201ENST00000514501 998 ntBASIC9.21□□□□□ -0.93
HSPG2P98160 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC9.21□□□□□ -0.93
HSPG2P98160 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HSPG2P98160 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HSPG2P98160 RGS5-216ENST00000449680 788 ntTSL 3 BASIC9.21□□□□□ -0.93
HSPG2P98160 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC9.21□□□□□ -0.93
HSPG2P98160 AC092896.1-201ENST00000465850 380 ntBASIC9.21□□□□□ -0.93
HSPG2P98160 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC9.21□□□□□ -0.93
HSPG2P98160 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC9.21□□□□□ -0.93
HSPG2P98160 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC9.21□□□□□ -0.93
HSPG2P98160 AC010976.2-201ENST00000609697 852 ntBASIC9.21□□□□□ -0.93
HSPG2P98160 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HSPG2P98160 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
HSPG2P98160 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HSPG2P98160 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HSPG2P98160 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HSPG2P98160 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms