Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.05■□□□□ -0
YBX1P67809 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
YBX1P67809 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.05■□□□□ -0
YBX1P67809 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
YBX1P67809 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 AC138969.3-201ENST00000546612 1459 ntBASIC15.05■□□□□ -0
YBX1P67809 AC138932.2-201ENST00000548268 1459 ntBASIC15.05■□□□□ -0
YBX1P67809 AC126755.4-201ENST00000549796 1459 ntBASIC15.05■□□□□ -0
YBX1P67809 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
YBX1P67809 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.05■□□□□ -0
YBX1P67809 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.05■□□□□ -0
YBX1P67809 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
YBX1P67809 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
YBX1P67809 CICP4-201ENST00000447359 2812 ntBASIC15.05■□□□□ -0
YBX1P67809 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
YBX1P67809 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
YBX1P67809 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.04■□□□□ -0
YBX1P67809 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
YBX1P67809 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
YBX1P67809 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.04■□□□□ -0
YBX1P67809 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.04■□□□□ -0
YBX1P67809 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 PIN1P1-201ENST00000412108 996 ntBASIC15.04■□□□□ -0
YBX1P67809 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.04■□□□□ -0
YBX1P67809 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.04■□□□□ -0
YBX1P67809 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.04■□□□□ -0
YBX1P67809 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.04■□□□□ -0
YBX1P67809 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.04■□□□□ -0
YBX1P67809 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
YBX1P67809 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.04■□□□□ -0
YBX1P67809 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.04■□□□□ -0
YBX1P67809 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
YBX1P67809 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.03■□□□□ -0
YBX1P67809 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 CICP11-201ENST00000434745 2827 ntBASIC15.03■□□□□ -0
YBX1P67809 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.03■□□□□ -0
YBX1P67809 AC084364.1-201ENST00000551967 1556 ntBASIC15.03■□□□□ -0
YBX1P67809 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.03■□□□□ -0
YBX1P67809 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.03■□□□□ -0
YBX1P67809 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms