Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RHBDL3P58872 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RHBDL3P58872 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
RHBDL3P58872 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 RN7SKP175-201ENST00000408472 289 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 AL354877.1-201ENST00000424412 413 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.01■□□□□ 0.47
RHBDL3P58872 HIST2H2BC-201ENST00000498492 580 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 ACTG1P17-201ENST00000558391 1119 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.01■□□□□ 0.47
RHBDL3P58872 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.01■□□□□ 0.47
RHBDL3P58872 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 AC244452.3-201ENST00000636814 210 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 C18orf15-201ENST00000623680 2534 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 AC087481.3-201ENST00000602886 1894 ntBASIC18.01■□□□□ 0.47
RHBDL3P58872 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RHBDL3P58872 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.01■□□□□ 0.47
RHBDL3P58872 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.01■□□□□ 0.47
RHBDL3P58872 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18■□□□□ 0.47
RHBDL3P58872 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18■□□□□ 0.47
RHBDL3P58872 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18■□□□□ 0.47
RHBDL3P58872 SCARNA20.5-201ENST00000516991 142 ntBASIC18■□□□□ 0.47
RHBDL3P58872 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18■□□□□ 0.47
RHBDL3P58872 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18■□□□□ 0.47
RHBDL3P58872 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 AC138696.2-201ENST00000607376 223 ntBASIC18■□□□□ 0.47
RHBDL3P58872 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18■□□□□ 0.47
RHBDL3P58872 AC136621.1-201ENST00000624017 2304 ntBASIC18■□□□□ 0.47
RHBDL3P58872 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RHBDL3P58872 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18■□□□□ 0.47
RHBDL3P58872 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18■□□□□ 0.47
RHBDL3P58872 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RHBDL3P58872 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18■□□□□ 0.47
RHBDL3P58872 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.99■□□□□ 0.47
RHBDL3P58872 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RHBDL3P58872 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.99■□□□□ 0.47
RHBDL3P58872 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 RN7SKP230-201ENST00000365642 335 ntBASIC17.99■□□□□ 0.47
RHBDL3P58872 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 FNTAP2-201ENST00000430308 634 ntBASIC17.99■□□□□ 0.47
RHBDL3P58872 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.99■□□□□ 0.47
RHBDL3P58872 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 AL358472.3-201ENST00000608147 415 ntBASIC17.99■□□□□ 0.47
RHBDL3P58872 AC007663.3-201ENST00000609632 465 ntBASIC17.99■□□□□ 0.47
RHBDL3P58872 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RHBDL3P58872 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RHBDL3P58872 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RHBDL3P58872 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms