Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 RN7SL769P-201ENST00000469386 295 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 AC245884.6-201ENST00000515672 1067 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 AC126915.1-201ENST00000522847 1038 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 FGFR3P5-201ENST00000564496 886 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 MIR4313-201ENST00000580760 101 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 AC007663.3-201ENST00000609632 465 ntBASIC14.78□□□□□ -0.04
CLDN6P56747 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN6P56747 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
CLDN6P56747 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN6P56747 AC008741.2-201ENST00000612792 3115 ntBASIC14.77□□□□□ -0.04
CLDN6P56747 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CLDN6P56747 AC006449.6-201ENST00000612330 2296 ntBASIC14.77□□□□□ -0.04
CLDN6P56747 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CLDN6P56747 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN6P56747 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 MIR33B-201ENST00000385104 96 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.77□□□□□ -0.05
CLDN6P56747 ACTBP8-201ENST00000403258 1108 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 POM121L10P-201ENST00000436994 1285 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN6P56747 LDHBP1-201ENST00000455730 1119 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN6P56747 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.77□□□□□ -0.05
CLDN6P56747 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN6P56747 MIR3619-201ENST00000579667 83 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 AP001505.2-201ENST00000616815 443 ntBASIC14.77□□□□□ -0.05
CLDN6P56747 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN6P56747 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CLDN6P56747 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 RPS2P36-201ENST00000456516 831 ntBASIC14.76□□□□□ -0.05
CLDN6P56747 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN6P56747 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN6P56747 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.76□□□□□ -0.05
CLDN6P56747 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN6P56747 SPCS2P2-201ENST00000603270 608 ntBASIC14.76□□□□□ -0.05
CLDN6P56747 AC091812.3-201ENST00000621362 345 ntBASIC14.76□□□□□ -0.05
CLDN6P56747 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN6P56747 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms