Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 AC144831.1-201ENST00000573312 2656 ntBASIC17.39■□□□□ 0.37
USP11P51784 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.39■□□□□ 0.37
USP11P51784 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP11P51784 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.39■□□□□ 0.37
USP11P51784 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
USP11P51784 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
USP11P51784 MSTO2P-201ENST00000314835 1709 ntBASIC17.38■□□□□ 0.37
USP11P51784 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USP11P51784 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
USP11P51784 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 RNU1-114P-201ENST00000365297 166 ntBASIC17.38■□□□□ 0.37
USP11P51784 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 ACTBP8-201ENST00000403258 1108 ntBASIC17.38■□□□□ 0.37
USP11P51784 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.38■□□□□ 0.37
USP11P51784 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.38■□□□□ 0.37
USP11P51784 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 TMEM14DP-201ENST00000422205 345 ntBASIC17.38■□□□□ 0.37
USP11P51784 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.38■□□□□ 0.37
USP11P51784 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.38■□□□□ 0.37
USP11P51784 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.38■□□□□ 0.37
USP11P51784 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 AC233724.13-201ENST00000598383 410 ntBASIC17.38■□□□□ 0.37
USP11P51784 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.38■□□□□ 0.37
USP11P51784 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP11P51784 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.38■□□□□ 0.37
USP11P51784 KRT8P14-201ENST00000414254 1442 ntBASIC17.38■□□□□ 0.37
USP11P51784 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
USP11P51784 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.37■□□□□ 0.37
USP11P51784 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.37■□□□□ 0.37
USP11P51784 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USP11P51784 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP11P51784 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USP11P51784 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.37■□□□□ 0.37
USP11P51784 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.37■□□□□ 0.37
USP11P51784 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.37■□□□□ 0.37
USP11P51784 AL162274.1-201ENST00000617191 1098 ntBASIC17.37■□□□□ 0.37
USP11P51784 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.37■□□□□ 0.37
USP11P51784 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP11P51784 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms