Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.82■□□□□ 0.28
BRCA2P51587 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCA2P51587 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCA2P51587 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
BRCA2P51587 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.81■□□□□ 0.28
BRCA2P51587 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 AC093909.3-201ENST00000504783 336 ntBASIC16.81■□□□□ 0.28
BRCA2P51587 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BRCA2P51587 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCA2P51587 HIST2H2BA-201ENST00000412169 381 ntBASIC16.81■□□□□ 0.28
BRCA2P51587 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.81■□□□□ 0.28
BRCA2P51587 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.81■□□□□ 0.28
BRCA2P51587 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.81■□□□□ 0.28
BRCA2P51587 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BRCA2P51587 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRCA2P51587 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BRCA2P51587 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 AC138696.2-201ENST00000607376 223 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 LINC00431-202ENST00000636375 159 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 AC124067.4-201ENST00000519691 2379 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 MIR566-201ENST00000385187 94 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.8■□□□□ 0.28
BRCA2P51587 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 PHBP15-201ENST00000574228 665 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
BRCA2P51587 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRCA2P51587 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BRCA2P51587 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.8■□□□□ 0.28
BRCA2P51587 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.8■□□□□ 0.28
BRCA2P51587 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.8■□□□□ 0.28
BRCA2P51587 AL645728.2-202ENST00000641679 227 ntBASIC16.8■□□□□ 0.28
BRCA2P51587 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.79■□□□□ 0.28
BRCA2P51587 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BRCA2P51587 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.79■□□□□ 0.28
BRCA2P51587 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.79■□□□□ 0.28
BRCA2P51587 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.79■□□□□ 0.28
BRCA2P51587 AL109837.1-201ENST00000603272 613 ntBASIC16.79■□□□□ 0.28
BRCA2P51587 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.79■□□□□ 0.28
BRCA2P51587 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BRCA2P51587 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 FKBP4P6-201ENST00000457486 1332 ntBASIC16.79■□□□□ 0.28
BRCA2P51587 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCA2P51587 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.79■□□□□ 0.28
BRCA2P51587 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCA2P51587 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.79■□□□□ 0.28
BRCA2P51587 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms