Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 CETN4P-206ENST00000642099 2168 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 REXO1L4P-201ENST00000605109 1937 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2CP42773 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 RPL37AP1-201ENST00000412502 279 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2CP42773 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 LINC01115-203ENST00000606068 577 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 MIR6069-201ENST00000620069 79 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 AL033527.5-202ENST00000641632 1098 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2CP42773 MTHFR-210ENST00000641407 2387 ntBASIC14.63□□□□□ -0.07
CDKN2CP42773 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKN2CP42773 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2CP42773 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2CP42773 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2CP42773 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2CP42773 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.62□□□□□ -0.07
CDKN2CP42773 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.62□□□□□ -0.07
CDKN2CP42773 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 RPL13P2-201ENST00000440687 659 ntBASIC14.62□□□□□ -0.07
CDKN2CP42773 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDKN2CP42773 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 MIR3687-2-201ENST00000577708 61 ntBASIC14.62□□□□□ -0.07
CDKN2CP42773 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 MIR3687-1-201ENST00000614492 61 ntBASIC14.62□□□□□ -0.07
CDKN2CP42773 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKN2CP42773 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKN2CP42773 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKN2CP42773 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms