Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.67■□□□□ 0.1
RPA3P35244 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 KRT8P37-201ENST00000451609 1420 ntBASIC15.67■□□□□ 0.1
RPA3P35244 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPA3P35244 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RPA3P35244 KRT18P28-201ENST00000453838 1332 ntBASIC15.67■□□□□ 0.1
RPA3P35244 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.67■□□□□ 0.1
RPA3P35244 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPA3P35244 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 HLA-J-203ENST00000494367 1087 ntBASIC15.66■□□□□ 0.1
RPA3P35244 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 AC025678.2-201ENST00000562061 970 ntBASIC15.66■□□□□ 0.1
RPA3P35244 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.66■□□□□ 0.1
RPA3P35244 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPA3P35244 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPA3P35244 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPA3P35244 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RPA3P35244 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RPA3P35244 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RPA3P35244 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.65■□□□□ 0.1
RPA3P35244 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 AC006504.5-208ENST00000588784 2401 ntBASIC15.65■□□□□ 0.1
RPA3P35244 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 BX640514.1-201ENST00000583223 1918 ntBASIC15.65■□□□□ 0.1
RPA3P35244 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RPA3P35244 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 AL139400.1-201ENST00000366220 510 ntBASIC15.65■□□□□ 0.1
RPA3P35244 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.65■□□□□ 0.1
RPA3P35244 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RPA3P35244 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.65■□□□□ 0.1
RPA3P35244 METTL21AP1-201ENST00000438852 635 ntBASIC15.65■□□□□ 0.1
RPA3P35244 AC109322.1-201ENST00000524499 1264 ntBASIC15.65■□□□□ 0.1
RPA3P35244 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.65■□□□□ 0.1
RPA3P35244 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.65■□□□□ 0.1
RPA3P35244 AC026979.3-201ENST00000607315 403 ntBASIC15.65■□□□□ 0.1
RPA3P35244 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPA3P35244 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPA3P35244 AC097359.2-201ENST00000604992 2389 ntBASIC15.65■□□□□ 0.1
RPA3P35244 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RPA3P35244 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPA3P35244 CYP4F24P-201ENST00000586049 1580 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms