Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 FAM90A7P-201ENST00000382628 1395 ntBASIC20.43■□□□□ 0.86
USP6P35125 FAM90A23P-201ENST00000400136 1395 ntBASIC20.43■□□□□ 0.86
USP6P35125 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
USP6P35125 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 AL008718.2-201ENST00000609206 1313 ntBASIC20.43■□□□□ 0.86
USP6P35125 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP6P35125 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.43■□□□□ 0.86
USP6P35125 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
USP6P35125 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.43■□□□□ 0.86
USP6P35125 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.43■□□□□ 0.86
USP6P35125 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.43■□□□□ 0.86
USP6P35125 EEF1DP6-201ENST00000449232 372 ntBASIC20.43■□□□□ 0.86
USP6P35125 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.43■□□□□ 0.86
USP6P35125 ALG3P1-201ENST00000508806 1114 ntBASIC20.43■□□□□ 0.86
USP6P35125 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.43■□□□□ 0.86
USP6P35125 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.43■□□□□ 0.86
USP6P35125 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.43■□□□□ 0.86
USP6P35125 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.43■□□□□ 0.86
USP6P35125 AL353770.1-201ENST00000614915 403 ntBASIC20.43■□□□□ 0.86
USP6P35125 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP6P35125 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
USP6P35125 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
USP6P35125 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 MBLAC2-202ENST00000514906 1936 ntBASIC20.42■□□□□ 0.86
USP6P35125 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 AL157791.1-201ENST00000553667 1699 ntBASIC20.42■□□□□ 0.86
USP6P35125 LILRP1-201ENST00000444199 1370 ntBASIC20.42■□□□□ 0.86
USP6P35125 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 CEP164P1-201ENST00000455142 418 ntBASIC20.42■□□□□ 0.86
USP6P35125 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.42■□□□□ 0.86
USP6P35125 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6P35125 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
USP6P35125 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.41■□□□□ 0.86
USP6P35125 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USP6P35125 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.41■□□□□ 0.86
USP6P35125 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP6P35125 AP000845.1-201ENST00000581677 2131 ntBASIC20.41■□□□□ 0.86
USP6P35125 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP6P35125 AC234782.1-201ENST00000451950 919 ntBASIC20.41■□□□□ 0.86
USP6P35125 MIR4754-201ENST00000582477 89 ntBASIC20.41■□□□□ 0.86
USP6P35125 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.41■□□□□ 0.86
USP6P35125 AC020922.3-201ENST00000595064 547 ntBASIC20.41■□□□□ 0.86
USP6P35125 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6P35125 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.41■□□□□ 0.86
USP6P35125 LTB4R2-202ENST00000528054 3092 ntBASIC20.41■□□□□ 0.86
USP6P35125 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6P35125 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP6P35125 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6P35125 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP6P35125 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
USP6P35125 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6P35125 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms