Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40LGP29965 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD40LGP29965 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40LGP29965 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
CD40LGP29965 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 AC004945.1-201ENST00000416738 983 ntBASIC13.76□□□□□ -0.21
CD40LGP29965 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 AC087163.2-201ENST00000457299 853 ntBASIC13.76□□□□□ -0.21
CD40LGP29965 TMEM198B-204ENST00000484016 896 ntBASIC13.76□□□□□ -0.21
CD40LGP29965 KRT18P31-201ENST00000506277 1292 ntBASIC13.76□□□□□ -0.21
CD40LGP29965 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD40LGP29965 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40LGP29965 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CD40LGP29965 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40LGP29965 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD40LGP29965 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.75□□□□□ -0.21
CD40LGP29965 SCARNA2-201ENST00000458748 420 ntBASIC13.75□□□□□ -0.21
CD40LGP29965 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40LGP29965 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40LGP29965 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.75□□□□□ -0.21
CD40LGP29965 CLEC4GP1-201ENST00000596555 870 ntBASIC13.75□□□□□ -0.21
CD40LGP29965 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CD40LGP29965 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.75□□□□□ -0.21
CD40LGP29965 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD40LGP29965 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40LGP29965 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40LGP29965 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms