Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN1P18031 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PTPN1P18031 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 C18orf15-201ENST00000623680 2534 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.31■□□□□ 0.2
PTPN1P18031 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN1P18031 AL645937.2-201ENST00000396808 931 ntBASIC16.31■□□□□ 0.2
PTPN1P18031 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.31■□□□□ 0.2
PTPN1P18031 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN1P18031 GPR53P-205ENST00000457298 1084 ntBASIC16.31■□□□□ 0.2
PTPN1P18031 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPN1P18031 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN1P18031 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPN1P18031 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PTPN1P18031 AL022328.1-201ENST00000610050 478 ntBASIC16.31■□□□□ 0.2
PTPN1P18031 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPN1P18031 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN1P18031 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN1P18031 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN1P18031 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 AL158070.2-201ENST00000623713 1621 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN1P18031 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN1P18031 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN1P18031 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 AL355864.2-201ENST00000447420 863 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 AC114812.1-204ENST00000449669 728 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN1P18031 CROCCP4-201ENST00000457096 498 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 HILS1-202ENST00000545329 423 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 AL512343.1-201ENST00000605837 169 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.3■□□□□ 0.2
PTPN1P18031 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN1P18031 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN1P18031 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN1P18031 DBET-201ENST00000630918 3363 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms