Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXC6P09630 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 AC011742.3-201ENST00000439053 820 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 Z97180.1-201ENST00000445173 988 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 RN7SL11P-201ENST00000471305 293 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 AC134698.3-201ENST00000523880 214 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.25■□□□□ 0.35
HOXC6P09630 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXC6P09630 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.25■□□□□ 0.35
HOXC6P09630 AC013355.1-201ENST00000562625 723 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 MIR3907-201ENST00000579424 151 ntBASIC17.25■□□□□ 0.35
HOXC6P09630 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.25■□□□□ 0.35
HOXC6P09630 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXC6P09630 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
HOXC6P09630 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HOXC6P09630 MIR33B-201ENST00000385104 96 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXC6P09630 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXC6P09630 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 AC021723.1-201ENST00000486306 515 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 AL161670.2-201ENST00000557650 1227 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 FGFR3P5-201ENST00000564496 886 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 AC026740.1-201ENST00000607068 791 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 AC091544.8-201ENST00000619490 361 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 AC079336.7-201ENST00000623428 1078 ntBASIC17.24■□□□□ 0.35
HOXC6P09630 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC6P09630 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXC6P09630 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC6P09630 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 AP000593.2-201ENST00000542775 1433 ntBASIC17.23■□□□□ 0.35
HOXC6P09630 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXC6P09630 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXC6P09630 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXC6P09630 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXC6P09630 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms