Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 AC010336.2-201ENST00000564226 506 ntBASIC15.28■□□□□ 0.04
CAPN1P07384 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 AC025048.6-201ENST00000634326 1161 ntBASIC15.28■□□□□ 0.04
CAPN1P07384 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CAPN1P07384 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPN1P07384 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN1P07384 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPN1P07384 AC126365.1-201ENST00000578585 1514 ntBASIC15.27■□□□□ 0.04
CAPN1P07384 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN1P07384 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN1P07384 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CAPN1P07384 KRT8P12-202ENST00000472924 1397 ntBASIC15.27■□□□□ 0.04
CAPN1P07384 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 AC063926.2-201ENST00000623766 1308 ntBASIC15.27■□□□□ 0.04
CAPN1P07384 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CAPN1P07384 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN1P07384 GAPDHP21-201ENST00000450301 1010 ntBASIC15.27■□□□□ 0.04
CAPN1P07384 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CAPN1P07384 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPN1P07384 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CAPN1P07384 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CAPN1P07384 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CAPN1P07384 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN1P07384 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CAPN1P07384 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN1P07384 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CAPN1P07384 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN1P07384 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CAPN1P07384 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN1P07384 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN1P07384 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN1P07384 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CAPN1P07384 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.26■□□□□ 0.03
CAPN1P07384 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 AC004233.3-201ENST00000607794 1269 ntBASIC15.26■□□□□ 0.03
CAPN1P07384 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.26■□□□□ 0.03
CAPN1P07384 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.26■□□□□ 0.03
CAPN1P07384 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.26■□□□□ 0.03
CAPN1P07384 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms