Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE6O95741 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 ACTG1P3-201ENST00000431775 1114 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 KRT18P64-201ENST00000434946 1219 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.19■□□□□ 0.02
CPNE6O95741 KRT223P-202ENST00000449164 1292 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 USP32P1-208ENST00000506594 1164 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.19■□□□□ 0.02
CPNE6O95741 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE6O95741 AL359711.2-201ENST00000563105 872 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CPNE6O95741 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CPNE6O95741 COX11-210ENST00000639671 696 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 AC018665.1-201ENST00000622927 1362 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 CICP4-201ENST00000447359 2812 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 PRAL-201ENST00000624952 3286 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 INTS4P2-202ENST00000614726 2019 ntBASIC15.19■□□□□ 0.02
CPNE6O95741 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE6O95741 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE6O95741 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE6O95741 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 AC136621.1-201ENST00000624017 2304 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 TMBIM7P-203ENST00000641617 1718 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 SOCS2P1-201ENST00000417727 557 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE6O95741 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE6O95741 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE6O95741 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 AC104989.1-201ENST00000519711 778 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 SLC25A47P1-201ENST00000531577 414 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 TDH-203ENST00000531764 1110 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 HNRNPUP1-201ENST00000554987 333 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE6O95741 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE6O95741 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.18■□□□□ 0.02
CPNE6O95741 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 MIR6799-201ENST00000620297 69 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CPNE6O95741 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CPNE6O95741 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms