Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
MBD4O95243 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MBD4O95243 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 AL157414.3-201ENST00000624276 1954 ntBASIC18.34■□□□□ 0.53
MBD4O95243 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.34■□□□□ 0.53
MBD4O95243 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MBD4O95243 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 AL645937.2-201ENST00000396808 931 ntBASIC18.34■□□□□ 0.53
MBD4O95243 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD4O95243 HLA-K-203ENST00000430151 1046 ntBASIC18.34■□□□□ 0.53
MBD4O95243 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.34■□□□□ 0.53
MBD4O95243 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD4O95243 AL359881.2-201ENST00000602973 570 ntBASIC18.34■□□□□ 0.53
MBD4O95243 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 AL138709.1-201ENST00000614840 1693 ntBASIC18.34■□□□□ 0.53
MBD4O95243 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MBD4O95243 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 REXO1L5P-201ENST00000622260 2098 ntBASIC18.34■□□□□ 0.53
MBD4O95243 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MBD4O95243 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
MBD4O95243 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 KRT8P14-201ENST00000414254 1442 ntBASIC18.33■□□□□ 0.53
MBD4O95243 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
MBD4O95243 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
MBD4O95243 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.33■□□□□ 0.53
MBD4O95243 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD4O95243 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MBD4O95243 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MBD4O95243 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MBD4O95243 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
MBD4O95243 AC016694.1-201ENST00000434179 700 ntBASIC18.33■□□□□ 0.52
MBD4O95243 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
MBD4O95243 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.33■□□□□ 0.52
MBD4O95243 AC244107.1-201ENST00000442033 332 ntBASIC18.33■□□□□ 0.52
MBD4O95243 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.33■□□□□ 0.52
MBD4O95243 AC104989.1-201ENST00000519711 778 ntBASIC18.33■□□□□ 0.52
MBD4O95243 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.33■□□□□ 0.52
MBD4O95243 KRT90P-201ENST00000549264 1064 ntBASIC18.33■□□□□ 0.52
MBD4O95243 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.33■□□□□ 0.52
MBD4O95243 AC025279.2-201ENST00000569730 653 ntBASIC18.33■□□□□ 0.52
MBD4O95243 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.33■□□□□ 0.52
MBD4O95243 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD4O95243 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.33■□□□□ 0.52
MBD4O95243 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MBD4O95243 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.33■□□□□ 0.52
MBD4O95243 AC073347.1-201ENST00000421633 2643 ntBASIC18.33■□□□□ 0.52
MBD4O95243 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.33■□□□□ 0.52
MBD4O95243 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
MBD4O95243 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
MBD4O95243 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.32■□□□□ 0.52
MBD4O95243 KLF2P4-201ENST00000451959 1225 ntBASIC18.32■□□□□ 0.52
MBD4O95243 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.32■□□□□ 0.52
MBD4O95243 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD4O95243 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MBD4O95243 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD4O95243 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD4O95243 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MBD4O95243 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms