Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CSPG5O95196 AL354989.2-201ENST00000435838 1540 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 AC136604.1-201ENST00000418535 575 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 KRT18P25-201ENST00000508931 1278 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 AC026410.3-201ENST00000514280 936 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.61■□□□□ 0.25
CSPG5O95196 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 KRT8P35-201ENST00000483942 1338 ntBASIC16.61■□□□□ 0.25
CSPG5O95196 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSPG5O95196 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.61■□□□□ 0.25
CSPG5O95196 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSPG5O95196 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 AC006449.5-201ENST00000610658 2098 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 MIR663B-201ENST00000408361 115 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.6■□□□□ 0.25
CSPG5O95196 HOMER2P2-201ENST00000451621 847 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.6■□□□□ 0.25
CSPG5O95196 AP006547.1-201ENST00000563435 692 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 RN7SL190P-201ENST00000582519 257 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 AC097359.3-201ENST00000603982 1210 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CSPG5O95196 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.6■□□□□ 0.25
CSPG5O95196 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.6■□□□□ 0.25
CSPG5O95196 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 AC244452.3-201ENST00000636814 210 ntBASIC16.6■□□□□ 0.25
CSPG5O95196 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSPG5O95196 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSPG5O95196 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.6■□□□□ 0.25
CSPG5O95196 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms