Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.77□□□□□ -0.2
ALX3O95076 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALX3O95076 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ALX3O95076 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.77□□□□□ -0.21
ALX3O95076 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC13.77□□□□□ -0.21
ALX3O95076 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 AC018845.2-201ENST00000568326 409 ntBASIC13.77□□□□□ -0.21
ALX3O95076 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 AC092364.2-202ENST00000597012 1073 ntBASIC13.77□□□□□ -0.21
ALX3O95076 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 AC104109.2-201ENST00000602919 1418 ntBASIC13.77□□□□□ -0.21
ALX3O95076 AC099522.2-201ENST00000607001 744 ntBASIC13.77□□□□□ -0.21
ALX3O95076 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 AC097376.2-205ENST00000610159 5334 ntBASIC13.77□□□□□ -0.21
ALX3O95076 FGD5P1-202ENST00000614866 2498 ntBASIC13.77□□□□□ -0.21
ALX3O95076 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 AC008267.7-201ENST00000624570 1194 ntBASIC13.77□□□□□ -0.21
ALX3O95076 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ALX3O95076 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ALX3O95076 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ALX3O95076 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.76□□□□□ -0.21
ALX3O95076 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.76□□□□□ -0.21
ALX3O95076 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.76□□□□□ -0.21
ALX3O95076 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.76□□□□□ -0.21
ALX3O95076 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 CICP11-201ENST00000434745 2827 ntBASIC13.76□□□□□ -0.21
ALX3O95076 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 FAM220BP-201ENST00000377689 816 ntBASIC13.76□□□□□ -0.21
ALX3O95076 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ALX3O95076 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
ALX3O95076 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.76□□□□□ -0.21
ALX3O95076 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.76□□□□□ -0.21
ALX3O95076 MIR3687-2-201ENST00000577708 61 ntBASIC13.76□□□□□ -0.21
ALX3O95076 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.76□□□□□ -0.21
ALX3O95076 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.76□□□□□ -0.21
ALX3O95076 MIR3687-1-201ENST00000614492 61 ntBASIC13.76□□□□□ -0.21
ALX3O95076 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.76□□□□□ -0.21
ALX3O95076 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms