Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 INTS4P2-202ENST00000614726 2019 ntBASIC14.92□□□□□ -0.02
CPNE3O75131 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 AC011477.6-201ENST00000604980 1927 ntBASIC14.92□□□□□ -0.02
CPNE3O75131 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE3O75131 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 SOCS2P1-201ENST00000417727 557 ntBASIC14.91□□□□□ -0.02
CPNE3O75131 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.91□□□□□ -0.02
CPNE3O75131 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE3O75131 AC134915.1-201ENST00000426461 574 ntBASIC14.91□□□□□ -0.02
CPNE3O75131 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.91□□□□□ -0.02
CPNE3O75131 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE3O75131 KRT18P43-201ENST00000469825 1281 ntBASIC14.91□□□□□ -0.02
CPNE3O75131 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.91□□□□□ -0.02
CPNE3O75131 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.91□□□□□ -0.02
CPNE3O75131 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.91□□□□□ -0.02
CPNE3O75131 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.91□□□□□ -0.02
CPNE3O75131 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CPNE3O75131 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.91□□□□□ -0.02
CPNE3O75131 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 AL607033.1-201ENST00000623900 1599 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.9□□□□□ -0.02
CPNE3O75131 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.9□□□□□ -0.02
CPNE3O75131 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CPNE3O75131 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CPNE3O75131 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms