Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PHGDHO43175 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.42■□□□□ 0.06
PHGDHO43175 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.42■□□□□ 0.06
PHGDHO43175 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 AP000845.1-201ENST00000581677 2131 ntBASIC15.42■□□□□ 0.06
PHGDHO43175 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.42■□□□□ 0.06
PHGDHO43175 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 AF228730.6-201ENST00000641497 218 ntBASIC15.42■□□□□ 0.06
PHGDHO43175 AC084121.3-201ENST00000641716 218 ntBASIC15.42■□□□□ 0.06
PHGDHO43175 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 AL390755.1-201ENST00000623716 2027 ntBASIC15.42■□□□□ 0.06
PHGDHO43175 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PHGDHO43175 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.42■□□□□ 0.06
PHGDHO43175 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PHGDHO43175 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PHGDHO43175 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 AC026748.1-201ENST00000624349 3251 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 AC232323.1-201ENST00000540724 2099 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 REXO1L5P-201ENST00000622260 2098 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 AC254562.1-201ENST00000417586 456 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 AC015910.1-201ENST00000579400 975 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
PHGDHO43175 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.41■□□□□ 0.06
PHGDHO43175 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 Z97205.2-201ENST00000564697 1639 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PHGDHO43175 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PHGDHO43175 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.41■□□□□ 0.06
PHGDHO43175 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.41■□□□□ 0.06
PHGDHO43175 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHGDHO43175 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHGDHO43175 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms