Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN1O15353 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN1O15353 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN1O15353 AP001065.2-201ENST00000617205 644 ntBASIC18.39■□□□□ 0.53
FOXN1O15353 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 TUBBP5-203ENST00000508529 1334 ntBASIC18.39■□□□□ 0.53
FOXN1O15353 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 AC008132.1-202ENST00000342005 1389 ntBASIC18.39■□□□□ 0.53
FOXN1O15353 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN1O15353 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN1O15353 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXN1O15353 AC097065.1-201ENST00000425737 517 ntBASIC18.38■□□□□ 0.53
FOXN1O15353 RN7SL181P-201ENST00000462921 277 ntBASIC18.38■□□□□ 0.53
FOXN1O15353 AC024681.1-201ENST00000521917 487 ntBASIC18.38■□□□□ 0.53
FOXN1O15353 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 AC091544.8-201ENST00000619490 361 ntBASIC18.38■□□□□ 0.53
FOXN1O15353 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXN1O15353 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXN1O15353 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXN1O15353 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FOXN1O15353 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN1O15353 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN1O15353 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
FOXN1O15353 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN1O15353 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 HSPB1P2-201ENST00000448722 546 ntBASIC18.37■□□□□ 0.53
FOXN1O15353 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 AC010234.1-201ENST00000494599 870 ntBASIC18.37■□□□□ 0.53
FOXN1O15353 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
FOXN1O15353 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.37■□□□□ 0.53
FOXN1O15353 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 AC144831.1-201ENST00000573312 2656 ntBASIC18.37■□□□□ 0.53
FOXN1O15353 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN1O15353 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
FOXN1O15353 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
FOXN1O15353 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
FOXN1O15353 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN1O15353 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN1O15353 AL596257.1-201ENST00000641463 2694 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms