Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A1O00337 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A1O00337 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC28A1O00337 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 AC012508.2-201ENST00000567613 1472 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 CNN2P11-201ENST00000429351 262 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 RPL13P2-201ENST00000440687 659 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 HLA-V-204ENST00000476601 1289 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 AC025181.2-201ENST00000606994 802 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 AF228730.6-201ENST00000641497 218 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 AC084121.3-201ENST00000641716 218 ntBASIC14.91□□□□□ -0.02
SLC28A1O00337 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A1O00337 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A1O00337 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A1O00337 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 AP000845.1-201ENST00000581677 2131 ntBASIC14.9□□□□□ -0.02
SLC28A1O00337 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.9□□□□□ -0.02
SLC28A1O00337 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 KRT18P43-201ENST00000469825 1281 ntBASIC14.9□□□□□ -0.02
SLC28A1O00337 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC28A1O00337 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 AC074044.1-201ENST00000609673 707 ntBASIC14.9□□□□□ -0.02
SLC28A1O00337 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A1O00337 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A1O00337 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC28A1O00337 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms