Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AL139339.2-201ENST00000608063 657 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AL627230.2-201ENST00000613254 655 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 LINC01165-201ENST00000445190 1623 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 KRT8P31-201ENST00000504812 1408 ntBASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 MIR3188-201ENST00000583494 85 ntBASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 AC006548.2-201ENST00000605217 529 ntBASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PTPN20CP-201ENST00000614090 920 ntBASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM88BA6NKF7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 AC114947.1-202ENST00000514136 344 ntBASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 HMGB1P24-201ENST00000611897 328 ntBASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM88BA6NKF7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 MIR648-201ENST00000385046 94 ntBASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 DPY19L2P5-201ENST00000456300 331 ntBASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms