Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC140878.1-201ENST00000565277 250 ntBASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC139530.3-201ENST00000620344 690 ntBASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 KRT18P28-201ENST00000453838 1332 ntBASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 DMBT1P1-203ENST00000636837 4628 ntBASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
TRGV1A0A0A0MS02 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 SLED1-202ENST00000512051 380 ntBASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TEX28P1-201ENST00000613479 1221 ntBASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TEX28P2-201ENST00000617764 1221 ntBASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV1A0A0A0MS02 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV1A0A0A0MS02 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms