Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 AC010327.5-201ENST00000586923 3061 ntBASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV18A0A075B6X5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 HSPA7-201ENST00000445535 1927 ntBASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 RNA5SP410-201ENST00000516285 106 ntBASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 CYP4F24P-201ENST00000586049 1580 ntBASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV18A0A075B6X5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AC136759.1-202ENST00000530858 2194 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AC025580.3-201ENST00000617932 1424 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AC009947.1-201ENST00000444350 727 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AC105233.2-201ENST00000523697 349 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AF228730.5-201ENST00000530288 346 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 HNRNPUP1-201ENST00000554987 333 ntBASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV18A0A075B6X5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms