Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 AC012508.2-201ENST00000567613 1472 ntBASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 LINC00528-201ENST00000600723 2160 ntBASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TNPO3Q9Y5L0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AC027369.6-201ENST00000525520 931 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 ZNF890P-202ENST00000530367 1156 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 LINC01115-203ENST00000606068 577 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AC025181.2-201ENST00000606994 802 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AL121723.1-201ENST00000445194 1519 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 AC087499.5-201ENST00000452760 1342 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNPO3Q9Y5L0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AC007292.2-201ENST00000593524 1812 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AL139400.1-201ENST00000366220 510 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 MIR1233-2-201ENST00000408138 82 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 MIR1233-1-201ENST00000408722 82 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AC107890.1-201ENST00000422478 521 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 AL109936.8-201ENST00000641772 604 ntBASIC15.1■□□□□ 0.01
TNPO3Q9Y5L0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms